Contents: [slideshow]

The Nature of a HPC System

Batch/Queue Systems: SGE

Running Parallel Jobs under SGE

GUIs and Qrsh

Filesystem Usage and Quotas

Practical Session




About this document

How do I run a job on a HPC machine?

Qsub Files 1/2

Example:

Create a qsub file, e.g., runmyjob.sh:

  #!/bin/bash

  #$ -S /bin/bash

  #$ -cwd
      # ...jobs runs in the current (working) directory...

  #$ -q serial.q
      # ...specify the queue in which the job should run...

  /bin/date
  /bin/hostname

Submit it:

  prompt> qsub runmyjob.sh


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