Contents: [slideshow]

• How do I run a job on a HPC machine
• Log in to the HPC machine using SSH
• Copy files to/from the machine

The Nature of a HPC System

• The Nature of a HPC System
• Actually, it's a cluster
• Sharing Resources

Batch/Queue Systems: SGE

• Batch/Queue Systems
• Job Submission
• Example: SGE
• SGE: Demo 1/2
• SGE: Demo 2/2
• Qsub Files 1/2
• Qsub Files 2/2
• Creating a Qsub File

Running Parallel Jobs under SGE

• Parallel Jobs under SGE: OpenMPI on Mace01
• Parallel Jobs under SGE: MPICHv1 on Mace01
• Parallel Jobs under SGE: MPICHv1 on Man2

GUIs and Qrsh

• Where's the GUI?
• GUIs and Qrsh
• Qrsh Examples

Filesystem Usage and Quotas

• Filesystem Usage and Quotas
• How much space am I using?
• File Quotas
• Reaching Your File Quota Limit

Practical Session

• Practical Session 1/2
• Practical Session 2/2

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About this document

How do I run a job on a HPC machine?

Log in to the HPC machine using SSH